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Mitochondrial DNA (mtDNA)

Mitochondrial DNA (mtDNA) is located outside the nucleus in the liquid portion of the cell (cytoplasm) inside cellular organelles called Mitochondria. Mitochondria are located in all complex or eukaryotic cells, including plant, animal, fungi, and single celled protists, which contain their own mtDNA genome. In animals with a backbone, or vertebrates, mtDNA is a double stranded, circular molecule that forms a circular genome, which ranges in size from sixteen to eighteen kilo-base pairs, depending on species. Each mitochondrion in a cell can have multiple copies of the mtDNA genome.

Format: Articles

Subject: Theories

Lynn Petra Alexander Sagan Margulis (1938-2011)

Lynn Petra Alexander Sagan Margulis was an American biologist, whose work in the mid-twentieth century focused on cells living together in a mutually advantageous relationship, studied cells and mitochondria in the US during the second half of the twentieth century. She developed a theory for the origin of eukaryotic cells, that proposed two kinds of structures found in eukaryotic cells mitochondria in animals, and plastids in plantsÑwere once free-living bacteria that lived harmoniously and in close proximity to larger cells, a scenario called symbiosis.

Format: Articles

Subject: People, Theories

The Source-Sink Model

The source-sink model, first proposed by biologist Francis Crick in 1970, is a theoretical system for how morphogens distribute themselves across small fields of early embryonic cells. A morphogen is a substance that determines the fate and phenotype of a group of cells through a concentration gradient of itself across that group. Crick’s theory has been experimentally confirmed with several morphogens, most notably with the protein bicoid , the first discovered morphogen. The model provides a theoretical structure for the understanding of some features of early embryonic development.

Format: Articles

Subject: Theories

Germ Layers

A germ layer is a group of cells in an embryo that interact with each other as the embryo develops and contribute to the formation of all organs and tissues. All animals, except perhaps sponges, form two or three germ layers. The germ layers develop early in embryonic life, through the process of gastrulation. During gastrulation, a hollow cluster of cells called a blastula reorganizes into two primary germ layers: an inner layer, called endoderm, and an outer layer, called ectoderm.

Format: Articles

Subject: Theories, Processes

David Reimer and John Money Gender Reassignment Controversy: The John/Joan Case

In the mid-1960s, psychologist John Money encouraged the gender reassignment of David Reimer, who was born a biological male but suffered irreparable damage to his penis as an infant. Born in 1965 as Bruce Reimer, his penis was irreparably damaged during infancy due to a failed circumcision. After encouragement from Money, Reimer’s parents decided to raise Reimer as a girl. Reimer underwent surgery as an infant to construct rudimentary female genitals, and was given female hormones during puberty.

Format: Articles

Subject: Theories

Mitochondria

All cells that have a nucleus, including plant, animal, fungal cells, and most single-celled protists, also have mitochondria. Mitochondria are particles called organelles found outside the nucleus in a cell's cytoplasm. The main function of mitochondria is to supply energy to the cell, and therefore to the organism. The theory for how mitochondria evolved, proposed by Lynn Margulis in the twentieth century, is that they were once free-living organisms.

Format: Articles

Subject: Organisms, Theories

Ernst Haeckel's Biogenetic Law (1866)

The biogenetic law is a theory of development and evolution proposed by Ernst Haeckel in Germany in the 1860s. It is one of several recapitulation theories, which posit that the stages of development for an animal embryo are the same as other animals' adult stages or forms. Commonly stated as ontogeny recapitulates phylogeny, the biogenetic law theorizes that the stages an animal embryo undergoes during development are a chronological replay of that species' past evolutionary forms.

Format: Articles

Subject: Theories

Neural Crest

Early in the process of development, vertebrate embryos develop a fold on the neural plate where the neural and epidermal ectoderms meet, called the neural crest. The neural crest produces neural crest cells (NCCs), which become multiple different cell types and contribute to tissues and organs as an embryo develops. A few of the organs and tissues include peripheral and enteric (gastrointestinal) neurons and glia, pigment cells, cartilage and bone of the cranium and face, and smooth muscle.

Format: Articles

Subject: Theories

Richard Woltereck's Concept of Reaktionsnorm

Richard Woltereck first described the concept of Reaktionsnorm (norm of reaction) in his 1909 paper 'Weitere experimentelle Untersuchungen uber Art-veranderung, speziell uber das Wesen quantitativer Artunterschiede bei Daphniden' ('Further investigations of type variation, specifically concerning the nature of quantitative differences between varieties of Daphnia'). This concept refers to the ways in which the environment can alter the development of an organism, and its adult characteristics.

Format: Articles

Subject: Theories

"On the Origin of Mitosing Cells" (1967), by Lynn Sagan

On the Origin of Mitosing Cells by Lynn Sagan appeared in the March 1967 edition of the Journal of Theoretical Biology. At the time the article was published, Lynn Sagan had divorced astronomer Carl Sagan, but kept his last name. Later, she remarried and changed her name to Lynn Margulis, and will be referred to as such throughout this article. In her 1967 article, Margulis develops a theory for the origin of complex cells that have enclosed nuclei, called eukaryotic cells.

Format: Articles

Subject: Publications, Theories

The Gradient Theory

The gradient theory is recognized as Charles Manning Child's most significant scientific contribution. Gradients brought together Child's interest in development and his fascination with the origins of individuality and organization. The gradient theory grew from his studies of regeneration, which were largely based on work he conducted with marine invertebrates, such as the ascidian flat worm, planaria and the hydroid, tubularia.

Format: Articles

Subject: Theories

Ovism

Ovism was one of two models of preformationism, a theory of generation prevalent in the late seventeenth through the end of the eighteenth century. Contrary to the competing theory of epigenesis (gradual emergence of form), preformationism held that the unborn offspring existed fully formed in the eggs or sperm of its parents prior to conception. The ovist model held that the maternal egg was the location of this preformed embryo, while the other preformationism model known as spermism preferred the paternal germ cell, as the name implies.

Format: Articles

Subject: Theories

John von Neumann's Cellular Automata

Cellular automata (CA) are mathematical models used to simulate complex systems or processes. In several fields, including biology, physics, and chemistry, CA are employed to analyze phenomena such as the growth of plants, DNA evolution, and embryogenesis. In the 1940s John von Neumann formalized the idea of cellular automata in order to create a theoretical model for a self-reproducing machine. Von Neumann's work was motivated by his attempt to understand biological evolution and self-reproduction.

Format: Articles

Subject: Theories

Human Evolution Inferred from Tooth Growth and Development

To study human evolution, researchers sometimes use microstructures found in human teeth and their knowledge of the processes by which those structures grow. Human fetusus begin to develop teeth in utero. As teeth grow, they form a hard outer substance, called enamel, through a process called amelogenesis. During amelogenesis, incremental layers of enamel form in a Circadian rhythm. This rhythmic deposition leaves the enamel with microstructures, called cross-striations and striae of Retzius, which have a regular periodicity.

Format: Articles

Subject: Theories

The Discovery of The Dikika Baby Fossil as Evidence for Australopithecine Growth and Development

When scientists discovered a 3.3
million-year-old skeleton of a child of the human lineage (hominin) in
2000, in the village of Hadar, Ethiopia, they were able to study growth
and development of Australopithecus
afarensis, an extinct hominin species. The team of researchers,
led by Zeresenay Alemseged of the Max Planck Institute for Evolutionary
Anthropology in Leipzig, Germany, named the fossil DIK 1-1 and nicknamed
it Dikika baby after the Dikika research site. The Dikika fossil

Format: Articles

Subject: Theories

Dinosaur Egg Parataxonomy

Dinosaur egg parataxonomy is a classification system that organizes dinosaur eggs by descriptive features such as shape, size, and shell thickness. Though egg parataxonomy originated in the nineteenth century, Zi-Kui Zhao from Beijing, China, developed a modern parataxonomic system in the late twentieth century. Zhao's system, published in 1975, enabled scientists to organize egg specimens according to observable features, and to communicate their findings.

Format: Articles

Subject: Theories

Essay: The Cuvier-Geoffroy Debate

In 1830, a dispute erupted in the halls of lÕAcad mie des Sciences in Paris between the two most prominent anatomists of the nineteenth century. Georges Cuvier and tienne Geoffroy Saint-Hilaire, once friends and colleagues at the Paris Museum, became arch rivals after this historical episode. Like many important disputes in the history of science, this debate echoes several points of contrasts between the two thinkers.

Format: Essays and Theses

Subject: Theories

Spermism

Spermism was one of two models of preformationism, a theory of embryo generation prevalent in the late seventeenth through the end of the eighteenth century. Spermist preformationism was the belief that offspring develop from a tiny fully-formed fetus contained within the head of a sperm cell. This model developed slightly later than the opposing ovist model because sperm cells were not seen under the microscope until about 1677.

Format: Articles

Subject: Theories

Preformationism in the Enlightenment

Preformationism was a theory of embryological development used in the late seventeenth through the late eighteenth centuries. This theory held that the generation of offspring occurs as a result of an unfolding and growth of preformed parts. There were two competing models of preformationism: the ovism model, in which the location of these preformed parts prior to gestation was the maternal egg, and the spermism model, in which a preformed individual or homunculus was thought to exist in the head of each sperm.

Format: Articles

Subject: Theories

Epigenetic Landscape

The epigenetic landscape is a concept representing embryonic development. It was proposed by Conrad Hal Waddington to illustrate the various developmental pathways a cell might take toward differentiation. The epigenetic landscape integrates the connected concepts of competence, induction, and regulative abilities of the genes into a single model designed to explain cellular differentiation, a long standing problem in embryology.

Format: Articles

Subject: Theories

Hartsoeker's Homunculus Sketch from Essai de Dioptrique

This embryology image is a pencil sketch by Nicolaas Hartsoeker, published as part of his 1694 French-language paper entitled Essai de Dioptrique, a semi-speculative work describing the sorts of new scientific observations that could be done using magnifying lenses. Dioptrique was published in Paris by the publishing house of Jean Anisson. The image depicts a curled up infant-like human, now referred to as a homunculus, inside the head of a sperm cell.

Format: Articles

Subject: Theories, Processes

Wilhelm Johannsen's Genotype-Phenotype Distinction

Wilhelm Johannsen in Denmark first proposed the distinction between genotype and phenotype in the study of heredity in 1909. This distinction is between the hereditary dispositions of organisms (their genotypes) and the ways in which those dispositions manifest themselves in the physical characteristics of those organisms (their phenotypes). This distinction was an outgrowth of Johannsen's experiments concerning heritable variation in plants, and it influenced his pure line theory of heredity.

Format: Articles

Subject: Theories

The Inheritance of Acquired Characteristics (1924), by Paul Kammerer

The Inheritance of Acquired Characteristics is a book published in 1924, written by Paul Kammerer, who studied developmental biology in Vienna, Austria, in the early twentieth century. The Inheritance of Acquired Characteristics summarizes Kammerer's experiments, and explains their significance. In his book, Kammerer aims to explain how offspring inherit traits from their parents. Some scholars criticized Kammerer's reports and interpretations, arguing that they were inaccurate and misleading, while others supported Kammerer's work.

Format: Articles

Subject: Publications, Theories

A Fate Map of the Chick Embryo

A 3-D fate map of the chicken (Gallus gallus) embryo with the prospective point of ingression and yolk. The area where the primitive streak will form during gastrulation is shown. The anterior- posterior axis is shown by labeling the anterior and posterio ends (A) and (P). Different colors indicate prospective fates of different regions of the epiblast after gastrulation.

Format: Graphics

Subject: Processes, Organisms, Theories

The Blastoderm in Chicks During Early Gastrulation

This image shows a chicken (Gallus gallus) embryo undergoing gastrulation in stage four (18-19 hrs after laying) according to the Hamburger-Hamilton staging series. At this point in time the chicken embryo is a blastoderm (shown in blue). The first magnification of the embryo shows that the blastoderm cell layers have thickened to form the primitive streak and Hensen's node. The primitive streak extends from the posterior (P) region to the anterior (A) region. The second rectangular magnification shows the blastoderm cross-sectioned through the primitive streak.

Format: Graphics

Subject: Processes, Organisms, Theories